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Mass Spectrometry
NIR Spectroscopy
 

Software archive

Contribute to the archive  Return to NIR Spectroscopy Page

Wavenumber/Wavelength Converter try our Wavenumber/Wavelength Converter

Excel

File: DATASLCT.xls
Description: Demonstration function to halve the number of variables
Contributed by: Howard Mark (hlmark@prodigy.net)

Matlab

File: crome.zip
Description: A suite of programs which compute correlation coefficients between pairs of wavelengths from an NIR data set and display them as a colour plot. See http://www.spectroscopyeurope.com/td_col.html for more details.
Contributed by: Tony Davies (td@nnirc.co.uk) and Tom Fearn (tom@stats.ucl.ac.uk)

SAS

Files to accompany "SAS® partial least squares for discriminant analysis" by James B. Reeves, III and Stephen R. Delwiche, JNIRS 16(1), 31-38 (2008).

Download documentation, program and data files.

File: 2004 version of Program II (1766 kB), ZIP File of Updated Programs and Documentation (53 kB), ZIP File of Programs (1767 kB), Program One Documentation (PDF: 139 kB), Program Two Documentation (PDF: 135 kB), Program Two Flowchart (PDF: 144 kB)
Description: Programs and documentation for the PLS using SAS, as described in the paper in Journal of Near Infrared Spectroscopy "SAS® partial least squares regression for analysis of spectroscopic data"
Contributed by: James B. Reeves, III and Stephen R. Delwiche

Stand-alone application

ParLeS v3.1—Shareware for chemometric analysis of spectroscopic data

Software capabilities:

  1. join multiple spectroscopic files from single directory into a single file
  2. numerous preprocessing and pretreatment algorithms
  3. performs principal components analysis (PCA)
  4. performs partial least squares regression (PLSR) with delete-n-cross validation
  5. performs PLSR1 modelling and prediction
  6. performs bootstrap aggregation PLSR (bagging-PLSR)
  7. provides options to save all output for external plotting and analyses
  8. version 3.1 supports interactive outlier detection

Screenshots and a description of this version are available at http://www.usyd.edu.au/agric/acpa/people/rvrossel/soft01.htm

If you would like to use ParLeS, please send email to Raphael VISCARRA ROSSEL (r.viscarra-rossel@usyd.edu.au) briefly explaining your application and your current situation (i.e. student, researcher, working at university, commercial organisation etc.).